PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000177547
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 308aa    MW: 34031.6 Da    PI: 5.721
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000177547genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-184392255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  MDP0000177547 43 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 92
                   799******.7*********32...35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.79E-1943100IPR016177DNA-binding domain
CDDcd000186.14E-324399No hitNo description
PfamPF008476.4E-134392IPR001471AP2/ERF domain
SMARTSM003807.4E-3643106IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.1E-2843100IPR001471AP2/ERF domain
PROSITE profilePS5103219.58543100IPR001471AP2/ERF domain
PRINTSPR003671.1E-74455IPR001471AP2/ERF domain
PRINTSPR003671.1E-76682IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MEFQFQQPKQ VSFAAAGIPK SSSKVGKLKG RNNNSRSNNN ANKFVGVRQR PSGRWVAEIK  60
DTTQKIRMWL GTFETAEEAA RAYDEAACLL RGSNTRTNFI TQVSMDSPLA SRIRNLLNTK  120
KGGGGATKQQ LAQLQRSISS DHDHLPPPSE QLVRKSTSST STSSSSDTTS LSSEVFQDNS  180
LLFDDVYKPD LRNCNEEFEL SSSFNNSQSN LLSWGSYQTG VDHFSFAQQA FEFPKHEAAA  240
ALSSAESTTT TSTAGEADSE LMDFERMKVE RQISASLYAM NGVQEYMETV HDPSEALWDL  300
PPLCSLFC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008386952.10.0PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLM5VRY31e-129M5VRY3_PRUPE; Uncharacterized protein
STRINGVIT_08s0007g07250.t011e-106(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-25related to AP2 11